Cluster: HRGMv2_4541_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_88 | HRGMv2_4541_88_3 | 1022 | 2986 | + | 9.B.18.2.1 |
| TF | HRGMv2_4541_88 | HRGMv2_4541_88_4 | 3223 | 4116 | + | HTH_3 |
| CAZyme | HRGMv2_4541_88 | HRGMv2_4541_88_5 | 4186 | 6771 | + | CBM78 | CBM78 | GH5_4 |
Gene ID: HRGMv2_4541_88_3
Type: TC
Location: 1022 - 2986 (+)
Type: TC
Location: 1022 - 2986 (+)
Gene ID: HRGMv2_4541_88_4
Type: TF
Location: 3223 - 4116 (+)
Type: TF
Location: 3223 - 4116 (+)
Gene ID: HRGMv2_4541_88_5
Type: CAZyme
Location: 4186 - 6771 (+)
Type: CAZyme
Location: 4186 - 6771 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.