Cluster: HRGMv2_4541_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_80 | HRGMv2_4541_80_77 | 82818 | 85199 | - | 3.A.3.23.2 |
| CAZyme | HRGMv2_4541_80 | HRGMv2_4541_80_78 | 85805 | 88051 | + | CBM79 | GH9 |
| pfam | HRGMv2_4541_80 | HRGMv2_4541_80_79 | 88334 | 89296 | + | Phage_integrase |
| TC | HRGMv2_4541_80 | HRGMv2_4541_80_80 | 89399 | 90796 | + | 2.A.25.1.4 |
Gene ID: HRGMv2_4541_80_77
Type: TC
Location: 82818 - 85199 (-)
Type: TC
Location: 82818 - 85199 (-)
Gene ID: HRGMv2_4541_80_78
Type: CAZyme
Location: 85805 - 88051 (+)
Type: CAZyme
Location: 85805 - 88051 (+)
Gene ID: HRGMv2_4541_80_79
Type: pfam
Location: 88334 - 89296 (+)
Type: pfam
Location: 88334 - 89296 (+)
Gene ID: HRGMv2_4541_80_80
Type: TC
Location: 89399 - 90796 (+)
Type: TC
Location: 89399 - 90796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.