Cluster: HRGMv2_4541_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- CGC Family ID: CGCFAM_01344
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4541_69 | HRGMv2_4541_69_9 | 9612 | 10838 | + | GH3 |
| peptidase | HRGMv2_4541_69 | HRGMv2_4541_69_10 | 11011 | 11694 | + | S14.UPW |
| TC | HRGMv2_4541_69 | HRGMv2_4541_69_11 | 11755 | 14256 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_4541_69_9
Type: CAZyme
Location: 9612 - 10838 (+)
Type: CAZyme
Location: 9612 - 10838 (+)
Gene ID: HRGMv2_4541_69_10
Type: peptidase
Location: 11011 - 11694 (+)
Type: peptidase
Location: 11011 - 11694 (+)
Gene ID: HRGMv2_4541_69_11
Type: TC
Location: 11755 - 14256 (+)
Type: TC
Location: 11755 - 14256 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.