Cluster: HRGMv2_4541_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4541
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4541_68 | HRGMv2_4541_68_3 | 3224 | 5059 | + | GH5_1 |
| pfam | HRGMv2_4541_68 | HRGMv2_4541_68_4 | 5156 | 5416 | - | Ribosomal_S20p |
| peptidase | HRGMv2_4541_68 | HRGMv2_4541_68_5 | 5633 | 6481 | + | A25.UNW |
| TC | HRGMv2_4541_68 | HRGMv2_4541_68_6 | 6690 | 9317 | - | 3.A.3.2.21 |
| TC | HRGMv2_4541_68 | HRGMv2_4541_68_7 | 9564 | 11435 | - | 9.A.8.1.5 |
| CAZyme | HRGMv2_4541_68 | HRGMv2_4541_68_8 | 11570 | 13714 | - | CBM80 | GH5_4 |
Gene ID: HRGMv2_4541_68_3
Type: CAZyme
Location: 3224 - 5059 (+)
Type: CAZyme
Location: 3224 - 5059 (+)
Gene ID: HRGMv2_4541_68_4
Type: pfam
Location: 5156 - 5416 (-)
Type: pfam
Location: 5156 - 5416 (-)
Gene ID: HRGMv2_4541_68_5
Type: peptidase
Location: 5633 - 6481 (+)
Type: peptidase
Location: 5633 - 6481 (+)
Gene ID: HRGMv2_4541_68_6
Type: TC
Location: 6690 - 9317 (-)
Type: TC
Location: 6690 - 9317 (-)
Gene ID: HRGMv2_4541_68_7
Type: TC
Location: 9564 - 11435 (-)
Type: TC
Location: 9564 - 11435 (-)
Gene ID: HRGMv2_4541_68_8
Type: CAZyme
Location: 11570 - 13714 (-)
Type: CAZyme
Location: 11570 - 13714 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.