Cluster: HRGMv2_4541_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- CGC Family ID: CGCFAM_04109
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_67 | HRGMv2_4541_67_14 | 9369 | 10922 | - | 3.D.1.8.1 |
| pfam | HRGMv2_4541_67 | HRGMv2_4541_67_15 | 11091 | 11906 | - | Pro_isomerase |
| NULL(UNKNOWN) | HRGMv2_4541_67 | HRGMv2_4541_67_16 | 11999 | 13201 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4541_67 | HRGMv2_4541_67_17 | 13696 | 16104 | + | GT35 |
Gene ID: HRGMv2_4541_67_14
Type: TC
Location: 9369 - 10922 (-)
Type: TC
Location: 9369 - 10922 (-)
Gene ID: HRGMv2_4541_67_15
Type: pfam
Location: 11091 - 11906 (-)
Type: pfam
Location: 11091 - 11906 (-)
Gene ID: HRGMv2_4541_67_16
Type:
Location: 11999 - 13201 (-)
Type:
Location: 11999 - 13201 (-)
Gene ID: HRGMv2_4541_67_17
Type: CAZyme
Location: 13696 - 16104 (+)
Type: CAZyme
Location: 13696 - 16104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.