Cluster: HRGMv2_4541_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4541
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4541_52 | HRGMv2_4541_52_24 | 27305 | 31033 | - | CBM77 | PL1 | PL9_1 |
| TC | HRGMv2_4541_52 | HRGMv2_4541_52_25 | 31413 | 32735 | + | 2.A.79.1.3 |
| pfam | HRGMv2_4541_52 | HRGMv2_4541_52_26 | 32786 | 34366 | - | PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| NULL(UNKNOWN) | HRGMv2_4541_52 | HRGMv2_4541_52_27 | 34393 | 35511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4541_52 | HRGMv2_4541_52_28 | 35812 | 36831 | + | GH130_2 |
Gene ID: HRGMv2_4541_52_24
Type: CAZyme
Location: 27305 - 31033 (-)
Type: CAZyme
Location: 27305 - 31033 (-)
Gene ID: HRGMv2_4541_52_25
Type: TC
Location: 31413 - 32735 (+)
Type: TC
Location: 31413 - 32735 (+)
Gene ID: HRGMv2_4541_52_26
Type: pfam
Location: 32786 - 34366 (-)
Type: pfam
Location: 32786 - 34366 (-)
Gene ID: HRGMv2_4541_52_27
Type:
Location: 34393 - 35511 (-)
Type:
Location: 34393 - 35511 (-)
Gene ID: HRGMv2_4541_52_28
Type: CAZyme
Location: 35812 - 36831 (+)
Type: CAZyme
Location: 35812 - 36831 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.