Cluster: HRGMv2_4541_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4541
- CGC Family ID: CGCFAM_10266
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_38 | HRGMv2_4541_38_5 | 5348 | 6274 | + | 8.A.21.2.3 |
| CAZyme | HRGMv2_4541_38 | HRGMv2_4541_38_6 | 6437 | 7174 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_4541_38 | HRGMv2_4541_38_7 | 7263 | 7721 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4541_38 | HRGMv2_4541_38_8 | 7735 | 8592 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4541_38 | HRGMv2_4541_38_9 | 8888 | 10339 | - | 9.A.11.1.2 |
| CAZyme | HRGMv2_4541_38 | HRGMv2_4541_38_10 | 10509 | 12347 | + | GH5_1 |
Gene ID: HRGMv2_4541_38_5
Type: TC
Location: 5348 - 6274 (+)
Type: TC
Location: 5348 - 6274 (+)
Gene ID: HRGMv2_4541_38_6
Type: CAZyme
Location: 6437 - 7174 (-)
Type: CAZyme
Location: 6437 - 7174 (-)
Gene ID: HRGMv2_4541_38_7
Type:
Location: 7263 - 7721 (-)
Type:
Location: 7263 - 7721 (-)
Gene ID: HRGMv2_4541_38_8
Type:
Location: 7735 - 8592 (-)
Type:
Location: 7735 - 8592 (-)
Gene ID: HRGMv2_4541_38_9
Type: TC
Location: 8888 - 10339 (-)
Type: TC
Location: 8888 - 10339 (-)
Gene ID: HRGMv2_4541_38_10
Type: CAZyme
Location: 10509 - 12347 (+)
Type: CAZyme
Location: 10509 - 12347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.