Cluster: HRGMv2_4541_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- CGC Family ID: CGCFAM_00917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4541_37 | HRGMv2_4541_37_2 | 1634 | 3520 | + | GH25 | GH25 |
| pfam | HRGMv2_4541_37 | HRGMv2_4541_37_3 | 3602 | 6919 | + | UvrD-helicase | PDDEXK_1 | ADDB_N |
| pfam | HRGMv2_4541_37 | HRGMv2_4541_37_4 | 6925 | 10563 | + | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| TC | HRGMv2_4541_37 | HRGMv2_4541_37_5 | 10624 | 12120 | - | 9.B.160.1.10 |
Gene ID: HRGMv2_4541_37_2
Type: CAZyme
Location: 1634 - 3520 (+)
Type: CAZyme
Location: 1634 - 3520 (+)
Gene ID: HRGMv2_4541_37_3
Type: pfam
Location: 3602 - 6919 (+)
Type: pfam
Location: 3602 - 6919 (+)
Gene ID: HRGMv2_4541_37_4
Type: pfam
Location: 6925 - 10563 (+)
Type: pfam
Location: 6925 - 10563 (+)
Gene ID: HRGMv2_4541_37_5
Type: TC
Location: 10624 - 12120 (-)
Type: TC
Location: 10624 - 12120 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.