Cluster: HRGMv2_4541_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4541
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4541_31 | HRGMv2_4541_31_15 | 13126 | 13749 | - | 9.B.18.1.1 |
| TF | HRGMv2_4541_31 | HRGMv2_4541_31_16 | 13989 | 14837 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4541_31 | HRGMv2_4541_31_17 | 15076 | 16254 | + | GlcNAc_2-epim |
| CAZyme | HRGMv2_4541_31 | HRGMv2_4541_31_18 | 16273 | 17214 | + | GH26 |
Gene ID: HRGMv2_4541_31_15
Type: TC
Location: 13126 - 13749 (-)
Type: TC
Location: 13126 - 13749 (-)
Gene ID: HRGMv2_4541_31_16
Type: TF
Location: 13989 - 14837 (-)
Type: TF
Location: 13989 - 14837 (-)
Gene ID: HRGMv2_4541_31_17
Type: pfam
Location: 15076 - 16254 (+)
Type: pfam
Location: 15076 - 16254 (+)
Gene ID: HRGMv2_4541_31_18
Type: CAZyme
Location: 16273 - 17214 (+)
Type: CAZyme
Location: 16273 - 17214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002362135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.