Cluster: HRGMv2_4540_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4540
- CGC Family ID: CGCFAM_02175
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4540_104 | HRGMv2_4540_104_2 | 1335 | 2807 | + | 2.A.2.1.1 |
| TF | HRGMv2_4540_104 | HRGMv2_4540_104_3 | 2811 | 3833 | - | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4540_104 | HRGMv2_4540_104_4 | 3921 | 4130 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4540_104 | HRGMv2_4540_104_5 | 4324 | 5367 | + | GH43_35 |
| pfam | HRGMv2_4540_104 | HRGMv2_4540_104_6 | 5380 | 6504 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | HRGMv2_4540_104 | HRGMv2_4540_104_7 | 6507 | 7247 | + | CE4 |
| CAZyme | HRGMv2_4540_104 | HRGMv2_4540_104_8 | 7261 | 8499 | + | GH2 |
Gene ID: HRGMv2_4540_104_2
Type: TC
Location: 1335 - 2807 (+)
Type: TC
Location: 1335 - 2807 (+)
Gene ID: HRGMv2_4540_104_3
Type: TF
Location: 2811 - 3833 (-)
Type: TF
Location: 2811 - 3833 (-)
Gene ID: HRGMv2_4540_104_4
Type:
Location: 3921 - 4130 (+)
Type:
Location: 3921 - 4130 (+)
Gene ID: HRGMv2_4540_104_5
Type: CAZyme
Location: 4324 - 5367 (+)
Type: CAZyme
Location: 4324 - 5367 (+)
Gene ID: HRGMv2_4540_104_6
Type: pfam
Location: 5380 - 6504 (+)
Type: pfam
Location: 5380 - 6504 (+)
Gene ID: HRGMv2_4540_104_7
Type: CAZyme
Location: 6507 - 7247 (+)
Type: CAZyme
Location: 6507 - 7247 (+)
Gene ID: HRGMv2_4540_104_8
Type: CAZyme
Location: 7261 - 8499 (+)
Type: CAZyme
Location: 7261 - 8499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Butyricicoccus
Species
Butyricicoccus sp018383195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.