dbCAN Logo

Cluster: HRGMv2_4540_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4540_405 HRGMv2_4540_405_9 7891 9093 + 3.A.1.4.3
pfam HRGMv2_4540_405 HRGMv2_4540_405_10 9142 10197 + URO-D
TC HRGMv2_4540_405 HRGMv2_4540_405_11 10404 11282 + 3.A.1.4.10
TC HRGMv2_4540_405 HRGMv2_4540_405_12 11298 12284 + 3.A.1.4.8
TC HRGMv2_4540_405 HRGMv2_4540_405_13 12281 13045 + 3.A.1.4.10
TC HRGMv2_4540_405 HRGMv2_4540_405_14 13049 13756 + 3.A.1.4.10
CAZyme HRGMv2_4540_405 HRGMv2_4540_405_15 13784 14815 + GH179
Gene ID: HRGMv2_4540_405_9
Type: TC
Location: 7891 - 9093 (+)
Gene ID: HRGMv2_4540_405_10
Type: pfam
Location: 9142 - 10197 (+)
Gene ID: HRGMv2_4540_405_11
Type: TC
Location: 10404 - 11282 (+)
Gene ID: HRGMv2_4540_405_12
Type: TC
Location: 11298 - 12284 (+)
Gene ID: HRGMv2_4540_405_13
Type: TC
Location: 12281 - 13045 (+)
Gene ID: HRGMv2_4540_405_14
Type: TC
Location: 13049 - 13756 (+)
Gene ID: HRGMv2_4540_405_15
Type: CAZyme
Location: 13784 - 14815 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List