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Cluster: HRGMv2_4538_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4538_9 HRGMv2_4538_9_12 10410 11651 + GT4
pfam HRGMv2_4538_9 HRGMv2_4538_9_13 11699 12544 + LicD
pfam HRGMv2_4538_9 HRGMv2_4538_9_14 12606 13349 + NTP_transferase | NTP_transf_3
CAZyme HRGMv2_4538_9 HRGMv2_4538_9_15 13397 14341 + GT32
NULL(UNKNOWN) HRGMv2_4538_9 HRGMv2_4538_9_16 14409 15530 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4538_9 HRGMv2_4538_9_17 15527 17473 + Hydrolase | Hydrolase_like | HAD_2
CAZyme HRGMv2_4538_9 HRGMv2_4538_9_18 17470 18246 + GT111
TC HRGMv2_4538_9 HRGMv2_4538_9_19 18243 19706 + 2.A.66.2.10
Gene ID: HRGMv2_4538_9_12
Type: CAZyme
Location: 10410 - 11651 (+)
Gene ID: HRGMv2_4538_9_13
Type: pfam
Location: 11699 - 12544 (+)
Gene ID: HRGMv2_4538_9_14
Type: pfam
Location: 12606 - 13349 (+)
Gene ID: HRGMv2_4538_9_15
Type: CAZyme
Location: 13397 - 14341 (+)
Gene ID: HRGMv2_4538_9_16
Type:
Location: 14409 - 15530 (+)
Gene ID: HRGMv2_4538_9_17
Type: pfam
Location: 15527 - 17473 (+)
Gene ID: HRGMv2_4538_9_18
Type: CAZyme
Location: 17470 - 18246 (+)
Gene ID: HRGMv2_4538_9_19
Type: TC
Location: 18243 - 19706 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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