Cluster: HRGMv2_4538_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4538
- CGC Family ID: CGCFAM_02064
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4538_6 | HRGMv2_4538_6_5 | 4263 | 5387 | + | GT4 |
| TC | HRGMv2_4538_6 | HRGMv2_4538_6_6 | 5384 | 6436 | + | 4.D.2.1.7 |
| STP | HRGMv2_4538_6 | HRGMv2_4538_6_7 | 6655 | 7452 | + | SBP_bac_3 |
| TC | HRGMv2_4538_6 | HRGMv2_4538_6_8 | 7593 | 8255 | + | 3.A.1.3.10 |
| TC | HRGMv2_4538_6 | HRGMv2_4538_6_9 | 8270 | 9013 | + | 3.A.1.3.14 |
Gene ID: HRGMv2_4538_6_5
Type: CAZyme
Location: 4263 - 5387 (+)
Type: CAZyme
Location: 4263 - 5387 (+)
Gene ID: HRGMv2_4538_6_6
Type: TC
Location: 5384 - 6436 (+)
Type: TC
Location: 5384 - 6436 (+)
Gene ID: HRGMv2_4538_6_7
Type: STP
Location: 6655 - 7452 (+)
Type: STP
Location: 6655 - 7452 (+)
Gene ID: HRGMv2_4538_6_8
Type: TC
Location: 7593 - 8255 (+)
Type: TC
Location: 7593 - 8255 (+)
Gene ID: HRGMv2_4538_6_9
Type: TC
Location: 8270 - 9013 (+)
Type: TC
Location: 8270 - 9013 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.