Cluster: HRGMv2_4538_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4538
- CGC Family ID: CGCFAM_02336
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4538_1 | HRGMv2_4538_1_227 | 251121 | 252728 | - | 3.A.1.121.4 |
| TC | HRGMv2_4538_1 | HRGMv2_4538_1_228 | 252923 | 254032 | - | 3.D.2.2.1 |
| CAZyme | HRGMv2_4538_1 | HRGMv2_4538_1_229 | 254276 | 256081 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_4538_1_227
Type: TC
Location: 251121 - 252728 (-)
Type: TC
Location: 251121 - 252728 (-)
Gene ID: HRGMv2_4538_1_228
Type: TC
Location: 252923 - 254032 (-)
Type: TC
Location: 252923 - 254032 (-)
Gene ID: HRGMv2_4538_1_229
Type: CAZyme
Location: 254276 - 256081 (+)
Type: CAZyme
Location: 254276 - 256081 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.