Cluster: HRGMv2_4538_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4538
- CGC Family ID: CGCFAM_10256
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4538_10 | HRGMv2_4538_10_41 | 39185 | 40504 | + | GH29 |
| CAZyme | HRGMv2_4538_10 | HRGMv2_4538_10_42 | 41292 | 42992 | - | GH5_36 |
| TF | HRGMv2_4538_10 | HRGMv2_4538_10_43 | 43080 | 43226 | - | HTH_3 |
| TC | HRGMv2_4538_10 | HRGMv2_4538_10_44 | 43599 | 46229 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_4538_10_41
Type: CAZyme
Location: 39185 - 40504 (+)
Type: CAZyme
Location: 39185 - 40504 (+)
Gene ID: HRGMv2_4538_10_42
Type: CAZyme
Location: 41292 - 42992 (-)
Type: CAZyme
Location: 41292 - 42992 (-)
Gene ID: HRGMv2_4538_10_43
Type: TF
Location: 43080 - 43226 (-)
Type: TF
Location: 43080 - 43226 (-)
Gene ID: HRGMv2_4538_10_44
Type: TC
Location: 43599 - 46229 (-)
Type: TC
Location: 43599 - 46229 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.