Cluster: HRGMv2_4538_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4538
- CGC Family ID: CGCFAM_02499
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4538_1 | HRGMv2_4538_1_16 | 7384 | 8232 | + | GH25 |
| pfam | HRGMv2_4538_1 | HRGMv2_4538_1_17 | 8273 | 8623 | + | Phage_holin_6_1 |
| NULL(UNKNOWN) | HRGMv2_4538_1 | HRGMv2_4538_1_18 | 8671 | 9159 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4538_1 | HRGMv2_4538_1_19 | 9217 | 10461 | - | 2.A.1.11.6 |
Gene ID: HRGMv2_4538_1_16
Type: CAZyme
Location: 7384 - 8232 (+)
Type: CAZyme
Location: 7384 - 8232 (+)
Gene ID: HRGMv2_4538_1_17
Type: pfam
Location: 8273 - 8623 (+)
Type: pfam
Location: 8273 - 8623 (+)
Gene ID: HRGMv2_4538_1_18
Type:
Location: 8671 - 9159 (+)
Type:
Location: 8671 - 9159 (+)
Gene ID: HRGMv2_4538_1_19
Type: TC
Location: 9217 - 10461 (-)
Type: TC
Location: 9217 - 10461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.