Cluster: HRGMv2_4537_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- CGC Family ID: CGCFAM_00765
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_33 | HRGMv2_4537_33_13 | 11502 | 13046 | + | 2.A.14.1.2 |
| pfam | HRGMv2_4537_33 | HRGMv2_4537_33_14 | 13074 | 14357 | + | Lar_N | LarA_C |
| CAZyme | HRGMv2_4537_33 | HRGMv2_4537_33_15 | 14402 | 15823 | + | AA7 |
Gene ID: HRGMv2_4537_33_13
Type: TC
Location: 11502 - 13046 (+)
Type: TC
Location: 11502 - 13046 (+)
Gene ID: HRGMv2_4537_33_14
Type: pfam
Location: 13074 - 14357 (+)
Type: pfam
Location: 13074 - 14357 (+)
Gene ID: HRGMv2_4537_33_15
Type: CAZyme
Location: 14402 - 15823 (+)
Type: CAZyme
Location: 14402 - 15823 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4537_33_13 | vegetarian > vegan | 2.36670 | 0.00455 |