Cluster: HRGMv2_4537_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- CGC Family ID: CGCFAM_10640
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4537_31 | HRGMv2_4537_31_3 | 3370 | 3906 | - | CE4 |
| pfam | HRGMv2_4537_31 | HRGMv2_4537_31_4 | 4172 | 5764 | + | PucR | HTH_30 |
| TC | HRGMv2_4537_31 | HRGMv2_4537_31_5 | 5911 | 7239 | + | 2.A.39.1.1 |
Gene ID: HRGMv2_4537_31_3
Type: CAZyme
Location: 3370 - 3906 (-)
Type: CAZyme
Location: 3370 - 3906 (-)
Gene ID: HRGMv2_4537_31_4
Type: pfam
Location: 4172 - 5764 (+)
Type: pfam
Location: 4172 - 5764 (+)
Gene ID: HRGMv2_4537_31_5
Type: TC
Location: 5911 - 7239 (+)
Type: TC
Location: 5911 - 7239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.