Cluster: HRGMv2_4537_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4537
- CGC Family ID: CGCFAM_02084
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4537_22 | HRGMv2_4537_22_19 | 18074 | 18982 | - | GT2 |
| CAZyme | HRGMv2_4537_22 | HRGMv2_4537_22_20 | 18985 | 20829 | - | GH13_39 |
| peptidase | HRGMv2_4537_22 | HRGMv2_4537_22_21 | 20845 | 23034 | - | X52.001 |
| NULL(UNKNOWN) | HRGMv2_4537_22 | HRGMv2_4537_22_22 | 23093 | 23605 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4537_22 | HRGMv2_4537_22_23 | 23688 | 24530 | - | 9.B.157.1.1 |
Gene ID: HRGMv2_4537_22_19
Type: CAZyme
Location: 18074 - 18982 (-)
Type: CAZyme
Location: 18074 - 18982 (-)
Gene ID: HRGMv2_4537_22_20
Type: CAZyme
Location: 18985 - 20829 (-)
Type: CAZyme
Location: 18985 - 20829 (-)
Gene ID: HRGMv2_4537_22_21
Type: peptidase
Location: 20845 - 23034 (-)
Type: peptidase
Location: 20845 - 23034 (-)
Gene ID: HRGMv2_4537_22_22
Type:
Location: 23093 - 23605 (-)
Type:
Location: 23093 - 23605 (-)
Gene ID: HRGMv2_4537_22_23
Type: TC
Location: 23688 - 24530 (-)
Type: TC
Location: 23688 - 24530 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.