Cluster: HRGMv2_4537_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4537_20 | HRGMv2_4537_20_18 | 19722 | 20438 | + | CE4 |
| peptidase | HRGMv2_4537_20 | HRGMv2_4537_20_19 | 20451 | 21383 | - | G05.UPW |
| pfam | HRGMv2_4537_20 | HRGMv2_4537_20_20 | 21519 | 23825 | + | Ribonuc_red_lgN | Ribonuc_red_lgC | TSCPD |
| TC | HRGMv2_4537_20 | HRGMv2_4537_20_21 | 24012 | 25481 | - | 3.A.24.3.1 |
Gene ID: HRGMv2_4537_20_18
Type: CAZyme
Location: 19722 - 20438 (+)
Type: CAZyme
Location: 19722 - 20438 (+)
Gene ID: HRGMv2_4537_20_19
Type: peptidase
Location: 20451 - 21383 (-)
Type: peptidase
Location: 20451 - 21383 (-)
Gene ID: HRGMv2_4537_20_20
Type: pfam
Location: 21519 - 23825 (+)
Type: pfam
Location: 21519 - 23825 (+)
Gene ID: HRGMv2_4537_20_21
Type: TC
Location: 24012 - 25481 (-)
Type: TC
Location: 24012 - 25481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.