Cluster: HRGMv2_4537_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4537_13 | HRGMv2_4537_13_3 | 2098 | 3591 | + | CBM50 |
| pfam | HRGMv2_4537_13 | HRGMv2_4537_13_4 | 3952 | 4821 | - | DegV |
| pfam | HRGMv2_4537_13 | HRGMv2_4537_13_5 | 4985 | 6157 | + | SpoIIP |
| TC | HRGMv2_4537_13 | HRGMv2_4537_13_6 | 6763 | 8124 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_4537_13_3
Type: CAZyme
Location: 2098 - 3591 (+)
Type: CAZyme
Location: 2098 - 3591 (+)
Gene ID: HRGMv2_4537_13_4
Type: pfam
Location: 3952 - 4821 (-)
Type: pfam
Location: 3952 - 4821 (-)
Gene ID: HRGMv2_4537_13_5
Type: pfam
Location: 4985 - 6157 (+)
Type: pfam
Location: 4985 - 6157 (+)
Gene ID: HRGMv2_4537_13_6
Type: TC
Location: 6763 - 8124 (-)
Type: TC
Location: 6763 - 8124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.