Cluster: HRGMv2_4537_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- CGC Family ID: CGCFAM_02239
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_110 | HRGMv2_4537_110_1 | 2 | 640 | - | 3.A.1.1.26 |
| CAZyme | HRGMv2_4537_110 | HRGMv2_4537_110_2 | 831 | 1955 | - | CE9 |
| pfam | HRGMv2_4537_110 | HRGMv2_4537_110_3 | 1946 | 2698 | - | Glucosamine_iso |
| pfam | HRGMv2_4537_110 | HRGMv2_4537_110_4 | 2719 | 3624 | - | DHDPS |
| TC | HRGMv2_4537_110 | HRGMv2_4537_110_5 | 3684 | 4529 | - | 3.A.1.1.39 |
| TC | HRGMv2_4537_110 | HRGMv2_4537_110_6 | 4545 | 5480 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_4537_110_1
Type: TC
Location: 2 - 640 (-)
Type: TC
Location: 2 - 640 (-)
Gene ID: HRGMv2_4537_110_2
Type: CAZyme
Location: 831 - 1955 (-)
Type: CAZyme
Location: 831 - 1955 (-)
Gene ID: HRGMv2_4537_110_3
Type: pfam
Location: 1946 - 2698 (-)
Type: pfam
Location: 1946 - 2698 (-)
Gene ID: HRGMv2_4537_110_4
Type: pfam
Location: 2719 - 3624 (-)
Type: pfam
Location: 2719 - 3624 (-)
Gene ID: HRGMv2_4537_110_5
Type: TC
Location: 3684 - 4529 (-)
Type: TC
Location: 3684 - 4529 (-)
Gene ID: HRGMv2_4537_110_6
Type: TC
Location: 4545 - 5480 (-)
Type: TC
Location: 4545 - 5480 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.