Cluster: HRGMv2_4537_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- CGC Family ID: CGCFAM_01007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_100 | HRGMv2_4537_100_2 | 1338 | 2252 | + | 3.A.1.34.1 |
| TC | HRGMv2_4537_100 | HRGMv2_4537_100_3 | 2253 | 3059 | + | 3.A.1.34.1 |
| CAZyme | HRGMv2_4537_100 | HRGMv2_4537_100_4 | 3376 | 4374 | - | CBM50 | CBM50 | GH25 |
Gene ID: HRGMv2_4537_100_2
Type: TC
Location: 1338 - 2252 (+)
Type: TC
Location: 1338 - 2252 (+)
Gene ID: HRGMv2_4537_100_3
Type: TC
Location: 2253 - 3059 (+)
Type: TC
Location: 2253 - 3059 (+)
Gene ID: HRGMv2_4537_100_4
Type: CAZyme
Location: 3376 - 4374 (-)
Type: CAZyme
Location: 3376 - 4374 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.