Cluster: HRGMv2_4537_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_83 | HRGMv2_4537_83_4 | 4217 | 4630 | + | 2.A.7.2.1 |
| pfam | HRGMv2_4537_83 | HRGMv2_4537_83_5 | 4644 | 5393 | + | Acetyltransf_1 | YoaP |
| pfam | HRGMv2_4537_83 | HRGMv2_4537_83_6 | 5676 | 6923 | - | S-methyl_trans |
| CAZyme | HRGMv2_4537_83 | HRGMv2_4537_83_7 | 7347 | 8624 | - | GT2 |
Gene ID: HRGMv2_4537_83_4
Type: TC
Location: 4217 - 4630 (+)
Type: TC
Location: 4217 - 4630 (+)
Gene ID: HRGMv2_4537_83_5
Type: pfam
Location: 4644 - 5393 (+)
Type: pfam
Location: 4644 - 5393 (+)
Gene ID: HRGMv2_4537_83_6
Type: pfam
Location: 5676 - 6923 (-)
Type: pfam
Location: 5676 - 6923 (-)
Gene ID: HRGMv2_4537_83_7
Type: CAZyme
Location: 7347 - 8624 (-)
Type: CAZyme
Location: 7347 - 8624 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.