Cluster: HRGMv2_4537_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- CGC Family ID: CGCFAM_02087
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_78 | HRGMv2_4537_78_3 | 1776 | 3074 | - | 2.A.26.1.1 |
| STP | HRGMv2_4537_78 | HRGMv2_4537_78_4 | 3161 | 3331 | - | Fer4 | Fer4 |
| TC | HRGMv2_4537_78 | HRGMv2_4537_78_5 | 3662 | 6154 | + | 3.A.9.1.2 |
| pfam | HRGMv2_4537_78 | HRGMv2_4537_78_6 | 6151 | 6660 | + | DUF4358 |
| pfam | HRGMv2_4537_78 | HRGMv2_4537_78_7 | 6697 | 7314 | - | DNA_alkylation |
| CAZyme | HRGMv2_4537_78 | HRGMv2_4537_78_8 | 7441 | 8919 | + | GH77 |
Gene ID: HRGMv2_4537_78_3
Type: TC
Location: 1776 - 3074 (-)
Type: TC
Location: 1776 - 3074 (-)
Gene ID: HRGMv2_4537_78_4
Type: STP
Location: 3161 - 3331 (-)
Type: STP
Location: 3161 - 3331 (-)
Gene ID: HRGMv2_4537_78_5
Type: TC
Location: 3662 - 6154 (+)
Type: TC
Location: 3662 - 6154 (+)
Gene ID: HRGMv2_4537_78_6
Type: pfam
Location: 6151 - 6660 (+)
Type: pfam
Location: 6151 - 6660 (+)
Gene ID: HRGMv2_4537_78_7
Type: pfam
Location: 6697 - 7314 (-)
Type: pfam
Location: 6697 - 7314 (-)
Gene ID: HRGMv2_4537_78_8
Type: CAZyme
Location: 7441 - 8919 (+)
Type: CAZyme
Location: 7441 - 8919 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.