Cluster: HRGMv2_4537_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_64 | HRGMv2_4537_64_9 | 7156 | 9603 | + | 3.A.3.23.2 |
| pfam | HRGMv2_4537_64 | HRGMv2_4537_64_10 | 9607 | 10038 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TF | HRGMv2_4537_64 | HRGMv2_4537_64_11 | 10574 | 11248 | + | HTH_3 |
| CAZyme | HRGMv2_4537_64 | HRGMv2_4537_64_12 | 11329 | 12435 | + | GT4 |
Gene ID: HRGMv2_4537_64_9
Type: TC
Location: 7156 - 9603 (+)
Type: TC
Location: 7156 - 9603 (+)
Gene ID: HRGMv2_4537_64_10
Type: pfam
Location: 9607 - 10038 (+)
Type: pfam
Location: 9607 - 10038 (+)
Gene ID: HRGMv2_4537_64_11
Type: TF
Location: 10574 - 11248 (+)
Type: TF
Location: 10574 - 11248 (+)
Gene ID: HRGMv2_4537_64_12
Type: CAZyme
Location: 11329 - 12435 (+)
Type: CAZyme
Location: 11329 - 12435 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.