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Cluster: HRGMv2_4537_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4537_60 HRGMv2_4537_60_4 4634 6709 + 3.A.23.1.1
STP HRGMv2_4537_60 HRGMv2_4537_60_5 6967 8136 + Aminotran_1_2
TC HRGMv2_4537_60 HRGMv2_4537_60_6 8177 9442 + 2.A.23.1.8
NULL(UNKNOWN) HRGMv2_4537_60 HRGMv2_4537_60_7 9491 9742 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4537_60 HRGMv2_4537_60_8 9815 10486 - Hydrolase | HAD | Hydrolase_like | HAD_2
TC HRGMv2_4537_60 HRGMv2_4537_60_9 10526 11554 - 2.A.20.1.7
CAZyme HRGMv2_4537_60 HRGMv2_4537_60_10 11617 12699 - GT4
CAZyme HRGMv2_4537_60 HRGMv2_4537_60_11 12696 14927 - GT4
Gene ID: HRGMv2_4537_60_4
Type: TC
Location: 4634 - 6709 (+)
Gene ID: HRGMv2_4537_60_5
Type: STP
Location: 6967 - 8136 (+)
Gene ID: HRGMv2_4537_60_6
Type: TC
Location: 8177 - 9442 (+)
Gene ID: HRGMv2_4537_60_7
Type:
Location: 9491 - 9742 (+)
Gene ID: HRGMv2_4537_60_8
Type: pfam
Location: 9815 - 10486 (-)
Gene ID: HRGMv2_4537_60_9
Type: TC
Location: 10526 - 11554 (-)
Gene ID: HRGMv2_4537_60_10
Type: CAZyme
Location: 11617 - 12699 (-)
Gene ID: HRGMv2_4537_60_11
Type: CAZyme
Location: 12696 - 14927 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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