Cluster: HRGMv2_4537_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4537_55 | HRGMv2_4537_55_14 | 10578 | 11429 | - | 2.A.115.1.5 |
| CAZyme | HRGMv2_4537_55 | HRGMv2_4537_55_15 | 11456 | 13126 | - | GH18 |
| STP | HRGMv2_4537_55 | HRGMv2_4537_55_16 | 13371 | 13943 | + | Pribosyltran |
| pfam | HRGMv2_4537_55 | HRGMv2_4537_55_17 | 15076 | 16320 | + | Bmp |
| TC | HRGMv2_4537_55 | HRGMv2_4537_55_18 | 16473 | 17057 | + | 3.A.1.2.12 |
Gene ID: HRGMv2_4537_55_14
Type: TC
Location: 10578 - 11429 (-)
Type: TC
Location: 10578 - 11429 (-)
Gene ID: HRGMv2_4537_55_15
Type: CAZyme
Location: 11456 - 13126 (-)
Type: CAZyme
Location: 11456 - 13126 (-)
Gene ID: HRGMv2_4537_55_16
Type: STP
Location: 13371 - 13943 (+)
Type: STP
Location: 13371 - 13943 (+)
Gene ID: HRGMv2_4537_55_17
Type: pfam
Location: 15076 - 16320 (+)
Type: pfam
Location: 15076 - 16320 (+)
Gene ID: HRGMv2_4537_55_18
Type: TC
Location: 16473 - 17057 (+)
Type: TC
Location: 16473 - 17057 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.