Cluster: HRGMv2_4537_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4537_39 | HRGMv2_4537_39_13 | 8799 | 9533 | - | GT26 |
| pfam | HRGMv2_4537_39 | HRGMv2_4537_39_14 | 9766 | 10794 | + | ABC_sub_bind |
| TC | HRGMv2_4537_39 | HRGMv2_4537_39_15 | 10901 | 11824 | + | 3.A.1.34.1 |
| TC | HRGMv2_4537_39 | HRGMv2_4537_39_16 | 11817 | 12755 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_4537_39_13
Type: CAZyme
Location: 8799 - 9533 (-)
Type: CAZyme
Location: 8799 - 9533 (-)
Gene ID: HRGMv2_4537_39_14
Type: pfam
Location: 9766 - 10794 (+)
Type: pfam
Location: 9766 - 10794 (+)
Gene ID: HRGMv2_4537_39_15
Type: TC
Location: 10901 - 11824 (+)
Type: TC
Location: 10901 - 11824 (+)
Gene ID: HRGMv2_4537_39_16
Type: TC
Location: 11817 - 12755 (+)
Type: TC
Location: 11817 - 12755 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.