Cluster: HRGMv2_4537_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4537_2 | HRGMv2_4537_2_46 | 50186 | 51436 | - | GT76 |
| pfam | HRGMv2_4537_2 | HRGMv2_4537_2_47 | 51433 | 52353 | - | Formyl_trans_N | Formyl_trans_C |
| pfam | HRGMv2_4537_2 | HRGMv2_4537_2_48 | 52350 | 52841 | - | Pep_deformylase |
| TC | HRGMv2_4537_2 | HRGMv2_4537_2_49 | 52854 | 55331 | - | 3.A.11.3.1 |
Gene ID: HRGMv2_4537_2_46
Type: CAZyme
Location: 50186 - 51436 (-)
Type: CAZyme
Location: 50186 - 51436 (-)
Gene ID: HRGMv2_4537_2_47
Type: pfam
Location: 51433 - 52353 (-)
Type: pfam
Location: 51433 - 52353 (-)
Gene ID: HRGMv2_4537_2_48
Type: pfam
Location: 52350 - 52841 (-)
Type: pfam
Location: 52350 - 52841 (-)
Gene ID: HRGMv2_4537_2_49
Type: TC
Location: 52854 - 55331 (-)
Type: TC
Location: 52854 - 55331 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Species
Flavonifractor avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.