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Cluster: HRGMv2_4535_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4535_9 HRGMv2_4535_9_32 34423 36171 + 8.A.59.2.1
NULL(UNKNOWN) HRGMv2_4535_9 HRGMv2_4535_9_33 36216 36317 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4535_9 HRGMv2_4535_9_34 36361 37335 + 3.A.1.1.10
TC HRGMv2_4535_9 HRGMv2_4535_9_35 37361 38266 + 3.A.1.1.29
STP HRGMv2_4535_9 HRGMv2_4535_9_36 38339 39964 + SBP_bac_1
CAZyme HRGMv2_4535_9 HRGMv2_4535_9_37 40087 41229 + CE9
CAZyme HRGMv2_4535_9 HRGMv2_4535_9_38 41272 42348 + GH179
pfam HRGMv2_4535_9 HRGMv2_4535_9_39 42362 43210 + AP_endonuc_2
TC HRGMv2_4535_9 HRGMv2_4535_9_40 43316 44677 - 2.A.66.1.33
TC HRGMv2_4535_9 HRGMv2_4535_9_41 44936 45760 - 3.A.1.5.16
TC HRGMv2_4535_9 HRGMv2_4535_9_42 45753 46763 - 3.A.1.5.16
TC HRGMv2_4535_9 HRGMv2_4535_9_43 46782 48032 - 3.A.1.5.16
TC HRGMv2_4535_9 HRGMv2_4535_9_44 48047 49054 - 3.A.1.5.16
TC HRGMv2_4535_9 HRGMv2_4535_9_45 49240 51111 - 3.A.1.5.6
Gene ID: HRGMv2_4535_9_32
Type: TC
Location: 34423 - 36171 (+)
Gene ID: HRGMv2_4535_9_33
Type:
Location: 36216 - 36317 (-)
Gene ID: HRGMv2_4535_9_34
Type: TC
Location: 36361 - 37335 (+)
Gene ID: HRGMv2_4535_9_35
Type: TC
Location: 37361 - 38266 (+)
Gene ID: HRGMv2_4535_9_36
Type: STP
Location: 38339 - 39964 (+)
Gene ID: HRGMv2_4535_9_37
Type: CAZyme
Location: 40087 - 41229 (+)
Gene ID: HRGMv2_4535_9_38
Type: CAZyme
Location: 41272 - 42348 (+)
Gene ID: HRGMv2_4535_9_39
Type: pfam
Location: 42362 - 43210 (+)
Gene ID: HRGMv2_4535_9_40
Type: TC
Location: 43316 - 44677 (-)
Gene ID: HRGMv2_4535_9_41
Type: TC
Location: 44936 - 45760 (-)
Gene ID: HRGMv2_4535_9_42
Type: TC
Location: 45753 - 46763 (-)
Gene ID: HRGMv2_4535_9_43
Type: TC
Location: 46782 - 48032 (-)
Gene ID: HRGMv2_4535_9_44
Type: TC
Location: 48047 - 49054 (-)
Gene ID: HRGMv2_4535_9_45
Type: TC
Location: 49240 - 51111 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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