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Cluster: HRGMv2_4535_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4535_77 HRGMv2_4535_77_2 891 1700 - CE1
CAZyme HRGMv2_4535_77 HRGMv2_4535_77_3 1721 2530 - CE1
STP HRGMv2_4535_77 HRGMv2_4535_77_4 2679 4313 - HATPase_c
STP HRGMv2_4535_77 HRGMv2_4535_77_5 4572 5861 + SBP_bac_1
TC HRGMv2_4535_77 HRGMv2_4535_77_6 6169 7086 + 3.A.1.1.10
TC HRGMv2_4535_77 HRGMv2_4535_77_7 7107 7994 + 3.A.1.1.29
TF HRGMv2_4535_77 HRGMv2_4535_77_8 7995 9569 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4535_77 HRGMv2_4535_77_9 9820 12237 + GH3
Gene ID: HRGMv2_4535_77_2
Type: CAZyme
Location: 891 - 1700 (-)
Gene ID: HRGMv2_4535_77_3
Type: CAZyme
Location: 1721 - 2530 (-)
Gene ID: HRGMv2_4535_77_4
Type: STP
Location: 2679 - 4313 (-)
Gene ID: HRGMv2_4535_77_5
Type: STP
Location: 4572 - 5861 (+)
Gene ID: HRGMv2_4535_77_6
Type: TC
Location: 6169 - 7086 (+)
Gene ID: HRGMv2_4535_77_7
Type: TC
Location: 7107 - 7994 (+)
Gene ID: HRGMv2_4535_77_8
Type: TF
Location: 7995 - 9569 (-)
Gene ID: HRGMv2_4535_77_9
Type: CAZyme
Location: 9820 - 12237 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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