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Cluster: HRGMv2_4535_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4535_62 HRGMv2_4535_62_4 2685 3758 - GH179
CAZyme HRGMv2_4535_62 HRGMv2_4535_62_5 3814 4854 - GH31_4
pfam HRGMv2_4535_62 HRGMv2_4535_62_6 4881 5828 - Glyco_hydro_31_2nd | Gal_mutarotas_2
NULL(UNKNOWN) HRGMv2_4535_62 HRGMv2_4535_62_7 5822 6991 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4535_62 HRGMv2_4535_62_8 7056 7916 - 3.A.1.1.11
TC HRGMv2_4535_62 HRGMv2_4535_62_9 7930 8823 - 3.A.1.1.20
STP HRGMv2_4535_62 HRGMv2_4535_62_10 8962 10305 - SBP_bac_1
TC HRGMv2_4535_62 HRGMv2_4535_62_11 10573 12396 + 8.A.59.2.1
Gene ID: HRGMv2_4535_62_4
Type: CAZyme
Location: 2685 - 3758 (-)
Gene ID: HRGMv2_4535_62_5
Type: CAZyme
Location: 3814 - 4854 (-)
Gene ID: HRGMv2_4535_62_6
Type: pfam
Location: 4881 - 5828 (-)
Gene ID: HRGMv2_4535_62_7
Type:
Location: 5822 - 6991 (-)
Gene ID: HRGMv2_4535_62_8
Type: TC
Location: 7056 - 7916 (-)
Gene ID: HRGMv2_4535_62_9
Type: TC
Location: 7930 - 8823 (-)
Gene ID: HRGMv2_4535_62_10
Type: STP
Location: 8962 - 10305 (-)
Gene ID: HRGMv2_4535_62_11
Type: TC
Location: 10573 - 12396 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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