dbCAN Logo

Cluster: HRGMv2_4535_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4535_26 HRGMv2_4535_26_15 15394 16476 - GH172
pfam HRGMv2_4535_26 HRGMv2_4535_26_16 16825 18189 - FAD_binding_2 | FAD_oxidored
STP HRGMv2_4535_26 HRGMv2_4535_26_17 18186 19583 - Pyr_redox_2
TC HRGMv2_4535_26 HRGMv2_4535_26_18 19608 20417 - 3.A.1.1.34
TC HRGMv2_4535_26 HRGMv2_4535_26_19 20514 21398 - 3.A.1.1.36
Gene ID: HRGMv2_4535_26_15
Type: CAZyme
Location: 15394 - 16476 (-)
Gene ID: HRGMv2_4535_26_16
Type: pfam
Location: 16825 - 18189 (-)
Gene ID: HRGMv2_4535_26_17
Type: STP
Location: 18186 - 19583 (-)
Gene ID: HRGMv2_4535_26_18
Type: TC
Location: 19608 - 20417 (-)
Gene ID: HRGMv2_4535_26_19
Type: TC
Location: 20514 - 21398 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List