Cluster: HRGMv2_4534_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4534
- CGC Family ID: CGCFAM_10636
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4534_9 | HRGMv2_4534_9_19 | 16650 | 19133 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_4534_9 | HRGMv2_4534_9_20 | 19532 | 20890 | + | CE4 |
| TF | HRGMv2_4534_9 | HRGMv2_4534_9_21 | 21201 | 22067 | - | HTH_AraC |
| CAZyme | HRGMv2_4534_9 | HRGMv2_4534_9_22 | 22239 | 23804 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_4534_9 | HRGMv2_4534_9_23 | 23970 | 24557 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4534_9 | HRGMv2_4534_9_24 | 24892 | 27204 | + | GH31_4 |
Gene ID: HRGMv2_4534_9_19
Type: TC
Location: 16650 - 19133 (+)
Type: TC
Location: 16650 - 19133 (+)
Gene ID: HRGMv2_4534_9_20
Type: CAZyme
Location: 19532 - 20890 (+)
Type: CAZyme
Location: 19532 - 20890 (+)
Gene ID: HRGMv2_4534_9_21
Type: TF
Location: 21201 - 22067 (-)
Type: TF
Location: 21201 - 22067 (-)
Gene ID: HRGMv2_4534_9_22
Type: CAZyme
Location: 22239 - 23804 (+)
Type: CAZyme
Location: 22239 - 23804 (+)
Gene ID: HRGMv2_4534_9_23
Type:
Location: 23970 - 24557 (+)
Type:
Location: 23970 - 24557 (+)
Gene ID: HRGMv2_4534_9_24
Type: CAZyme
Location: 24892 - 27204 (+)
Type: CAZyme
Location: 24892 - 27204 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAHZIE01
Species
JAHZIE01 sp019419895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.