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Cluster: HRGMv2_4534_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4534_5 HRGMv2_4534_5_52 53685 54641 + GH2
CAZyme HRGMv2_4534_5 HRGMv2_4534_5_53 54595 55428 + GH2
TC HRGMv2_4534_5 HRGMv2_4534_5_54 55818 56732 + 1.A.35.3.2
TF HRGMv2_4534_5 HRGMv2_4534_5_55 57059 57322 - 0043707
NULL(UNKNOWN) HRGMv2_4534_5 HRGMv2_4534_5_56 57403 57852 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4534_5 HRGMv2_4534_5_57 57960 59024 + 3.A.1.135.5
TC HRGMv2_4534_5 HRGMv2_4534_5_58 59026 59892 + 3.A.1.210.9
TC HRGMv2_4534_5 HRGMv2_4534_5_59 59889 61715 + 3.A.1.106.3
STP HRGMv2_4534_5 HRGMv2_4534_5_60 62135 63232 + Peptidase_M23
CAZyme HRGMv2_4534_5 HRGMv2_4534_5_61 63261 64151 + CE4
NULL(UNKNOWN) HRGMv2_4534_5 HRGMv2_4534_5_62 64272 65345 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4534_5 HRGMv2_4534_5_63 65695 66552 - 3.A.1.132.3
Gene ID: HRGMv2_4534_5_52
Type: CAZyme
Location: 53685 - 54641 (+)
Gene ID: HRGMv2_4534_5_53
Type: CAZyme
Location: 54595 - 55428 (+)
Gene ID: HRGMv2_4534_5_54
Type: TC
Location: 55818 - 56732 (+)
Gene ID: HRGMv2_4534_5_55
Type: TF
Location: 57059 - 57322 (-)
Gene ID: HRGMv2_4534_5_56
Type:
Location: 57403 - 57852 (+)
Gene ID: HRGMv2_4534_5_57
Type: TC
Location: 57960 - 59024 (+)
Gene ID: HRGMv2_4534_5_58
Type: TC
Location: 59026 - 59892 (+)
Gene ID: HRGMv2_4534_5_59
Type: TC
Location: 59889 - 61715 (+)
Gene ID: HRGMv2_4534_5_60
Type: STP
Location: 62135 - 63232 (+)
Gene ID: HRGMv2_4534_5_61
Type: CAZyme
Location: 63261 - 64151 (+)
Gene ID: HRGMv2_4534_5_62
Type:
Location: 64272 - 65345 (+)
Gene ID: HRGMv2_4534_5_63
Type: TC
Location: 65695 - 66552 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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