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Cluster: HRGMv2_4534_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4534_3 HRGMv2_4534_3_22 30530 31402 - 9.B.157.1.1
NULL(UNKNOWN) HRGMv2_4534_3 HRGMv2_4534_3_23 31371 31508 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4534_3 HRGMv2_4534_3_24 31540 32544 - 9.B.157.1.1
TC HRGMv2_4534_3 HRGMv2_4534_3_25 33035 33976 + 3.A.1.144.2
pfam HRGMv2_4534_3 HRGMv2_4534_3_26 33973 34764 + ABC2_membrane | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4
CAZyme HRGMv2_4534_3 HRGMv2_4534_3_27 35211 36443 - GH29
CAZyme HRGMv2_4534_3 HRGMv2_4534_3_28 36517 37578 - GH179
TC HRGMv2_4534_3 HRGMv2_4534_3_29 37753 39144 - 2.A.38.4.3
Gene ID: HRGMv2_4534_3_22
Type: TC
Location: 30530 - 31402 (-)
Gene ID: HRGMv2_4534_3_23
Type:
Location: 31371 - 31508 (-)
Gene ID: HRGMv2_4534_3_24
Type: TC
Location: 31540 - 32544 (-)
Gene ID: HRGMv2_4534_3_25
Type: TC
Location: 33035 - 33976 (+)
Gene ID: HRGMv2_4534_3_26
Type: pfam
Location: 33973 - 34764 (+)
Gene ID: HRGMv2_4534_3_27
Type: CAZyme
Location: 35211 - 36443 (-)
Gene ID: HRGMv2_4534_3_28
Type: CAZyme
Location: 36517 - 37578 (-)
Gene ID: HRGMv2_4534_3_29
Type: TC
Location: 37753 - 39144 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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