Cluster: HRGMv2_4534_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4534
- CGC Family ID: CGCFAM_00159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4534_87 | HRGMv2_4534_87_3 | 778 | 1377 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_4534_87 | HRGMv2_4534_87_4 | 1448 | 1609 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4534_87 | HRGMv2_4534_87_5 | 1737 | 2948 | - | HTH_AraC |
| CAZyme | HRGMv2_4534_87 | HRGMv2_4534_87_6 | 3212 | 5029 | + | GH3 |
| CAZyme | HRGMv2_4534_87 | HRGMv2_4534_87_7 | 5046 | 7262 | + | GH2 |
| TC | HRGMv2_4534_87 | HRGMv2_4534_87_8 | 7301 | 8701 | + | 2.A.2.3.1 |
Gene ID: HRGMv2_4534_87_3
Type: CAZyme
Location: 778 - 1377 (-)
Type: CAZyme
Location: 778 - 1377 (-)
Gene ID: HRGMv2_4534_87_4
Type:
Location: 1448 - 1609 (-)
Type:
Location: 1448 - 1609 (-)
Gene ID: HRGMv2_4534_87_5
Type: TF
Location: 1737 - 2948 (-)
Type: TF
Location: 1737 - 2948 (-)
Gene ID: HRGMv2_4534_87_6
Type: CAZyme
Location: 3212 - 5029 (+)
Type: CAZyme
Location: 3212 - 5029 (+)
Gene ID: HRGMv2_4534_87_7
Type: CAZyme
Location: 5046 - 7262 (+)
Type: CAZyme
Location: 5046 - 7262 (+)
Gene ID: HRGMv2_4534_87_8
Type: TC
Location: 7301 - 8701 (+)
Type: TC
Location: 7301 - 8701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAHZIE01
Species
JAHZIE01 sp019419895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.