Cluster: HRGMv2_4534_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4534
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4534_37 | HRGMv2_4534_37_17 | 16493 | 16645 | - | 3.A.1.106.3 |
| TC | HRGMv2_4534_37 | HRGMv2_4534_37_18 | 16642 | 17019 | - | 3.A.1.135.9 |
| pfam | HRGMv2_4534_37 | HRGMv2_4534_37_19 | 17618 | 17863 | + | Y1_Tnp |
| NULL(UNKNOWN) | HRGMv2_4534_37 | HRGMv2_4534_37_20 | 18130 | 18273 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4534_37 | HRGMv2_4534_37_21 | 18516 | 19406 | + | 3.A.1.147.8 |
| pfam | HRGMv2_4534_37 | HRGMv2_4534_37_22 | 19431 | 20321 | + | ABC2_membrane_2 | ABC2_membrane_5 |
| CAZyme | HRGMv2_4534_37 | HRGMv2_4534_37_23 | 20362 | 21552 | + | GT4 |
Gene ID: HRGMv2_4534_37_17
Type: TC
Location: 16493 - 16645 (-)
Type: TC
Location: 16493 - 16645 (-)
Gene ID: HRGMv2_4534_37_18
Type: TC
Location: 16642 - 17019 (-)
Type: TC
Location: 16642 - 17019 (-)
Gene ID: HRGMv2_4534_37_19
Type: pfam
Location: 17618 - 17863 (+)
Type: pfam
Location: 17618 - 17863 (+)
Gene ID: HRGMv2_4534_37_20
Type:
Location: 18130 - 18273 (+)
Type:
Location: 18130 - 18273 (+)
Gene ID: HRGMv2_4534_37_21
Type: TC
Location: 18516 - 19406 (+)
Type: TC
Location: 18516 - 19406 (+)
Gene ID: HRGMv2_4534_37_22
Type: pfam
Location: 19431 - 20321 (+)
Type: pfam
Location: 19431 - 20321 (+)
Gene ID: HRGMv2_4534_37_23
Type: CAZyme
Location: 20362 - 21552 (+)
Type: CAZyme
Location: 20362 - 21552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAHZIE01
Species
JAHZIE01 sp019419895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.