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Cluster: HRGMv2_4534_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4534_35 HRGMv2_4534_35_1 1 795 + 2.A.25.1.9
TC HRGMv2_4534_35 HRGMv2_4534_35_2 792 1442 - 9.B.27.2.5
CAZyme HRGMv2_4534_35 HRGMv2_4534_35_3 1717 2898 - CE9
pfam HRGMv2_4534_35 HRGMv2_4534_35_4 2963 3730 - Glucosamine_iso
CAZyme HRGMv2_4534_35 HRGMv2_4534_35_5 3773 5323 - GH163
NULL(UNKNOWN) HRGMv2_4534_35 HRGMv2_4534_35_6 5501 5854 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_4534_35 HRGMv2_4534_35_7 6048 6893 + 0036286
CAZyme HRGMv2_4534_35 HRGMv2_4534_35_8 7036 9018 + GH36
NULL(UNKNOWN) HRGMv2_4534_35 HRGMv2_4534_35_9 9045 9263 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4534_35 HRGMv2_4534_35_10 9385 10110 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_4534_35 HRGMv2_4534_35_11 10344 11639 - 2.A.86.1.6
TC HRGMv2_4534_35 HRGMv2_4534_35_12 11802 12824 + 9.B.70.1.1
pfam HRGMv2_4534_35 HRGMv2_4534_35_13 12769 13248 + Spore_III_AB
pfam HRGMv2_4534_35 HRGMv2_4534_35_14 13290 13484 + SpoIIIAC
TC HRGMv2_4534_35 HRGMv2_4534_35_15 13488 13874 + 9.B.70.1.1
Gene ID: HRGMv2_4534_35_1
Type: TC
Location: 1 - 795 (+)
Gene ID: HRGMv2_4534_35_2
Type: TC
Location: 792 - 1442 (-)
Gene ID: HRGMv2_4534_35_3
Type: CAZyme
Location: 1717 - 2898 (-)
Gene ID: HRGMv2_4534_35_4
Type: pfam
Location: 2963 - 3730 (-)
Gene ID: HRGMv2_4534_35_5
Type: CAZyme
Location: 3773 - 5323 (-)
Gene ID: HRGMv2_4534_35_6
Type:
Location: 5501 - 5854 (-)
Gene ID: HRGMv2_4534_35_7
Type: TF
Location: 6048 - 6893 (+)
Gene ID: HRGMv2_4534_35_8
Type: CAZyme
Location: 7036 - 9018 (+)
Gene ID: HRGMv2_4534_35_9
Type:
Location: 9045 - 9263 (+)
Gene ID: HRGMv2_4534_35_10
Type: pfam
Location: 9385 - 10110 (+)
Gene ID: HRGMv2_4534_35_11
Type: TC
Location: 10344 - 11639 (-)
Gene ID: HRGMv2_4534_35_12
Type: TC
Location: 11802 - 12824 (+)
Gene ID: HRGMv2_4534_35_13
Type: pfam
Location: 12769 - 13248 (+)
Gene ID: HRGMv2_4534_35_14
Type: pfam
Location: 13290 - 13484 (+)
Gene ID: HRGMv2_4534_35_15
Type: TC
Location: 13488 - 13874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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