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Cluster: HRGMv2_4534_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4534_27 HRGMv2_4534_27_9 8845 9885 + 9.A.23.1.1
NULL(UNKNOWN) HRGMv2_4534_27 HRGMv2_4534_27_10 9943 10893 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4534_27 HRGMv2_4534_27_11 11413 12399 - CE2
CAZyme HRGMv2_4534_27 HRGMv2_4534_27_12 12433 14613 - CBM67 | GH78
NULL(UNKNOWN) HRGMv2_4534_27 HRGMv2_4534_27_13 14667 16652 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4534_27 HRGMv2_4534_27_14 16828 17844 - GH177
CAZyme HRGMv2_4534_27 HRGMv2_4534_27_15 18320 19615 - GH109
TF HRGMv2_4534_27 HRGMv2_4534_27_16 19810 20715 + HTH_AraC
CAZyme HRGMv2_4534_27 HRGMv2_4534_27_17 20754 24203 + GH106
pfam HRGMv2_4534_27 HRGMv2_4534_27_18 24378 25694 + FRG
TC HRGMv2_4534_27 HRGMv2_4534_27_19 26004 27410 - 2.A.66.1.45
NULL(UNKNOWN) HRGMv2_4534_27 HRGMv2_4534_27_20 27601 27885 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4534_27 HRGMv2_4534_27_21 27918 29531 - 3.A.1.20.2
TC HRGMv2_4534_27 HRGMv2_4534_27_22 29521 30303 - 3.A.1.20.1
STP HRGMv2_4534_27 HRGMv2_4534_27_23 30291 31271 - SBP_bac_1
pfam HRGMv2_4534_27 HRGMv2_4534_27_24 32090 32701 + G3P_acyltransf
TC HRGMv2_4534_27 HRGMv2_4534_27_25 34024 35340 + 2.A.37.2.2
TC HRGMv2_4534_27 HRGMv2_4534_27_26 35396 35977 - 3.A.1.124.3
Gene ID: HRGMv2_4534_27_9
Type: TC
Location: 8845 - 9885 (+)
Gene ID: HRGMv2_4534_27_10
Type:
Location: 9943 - 10893 (+)
Gene ID: HRGMv2_4534_27_11
Type: CAZyme
Location: 11413 - 12399 (-)
Gene ID: HRGMv2_4534_27_12
Type: CAZyme
Location: 12433 - 14613 (-)
Gene ID: HRGMv2_4534_27_13
Type:
Location: 14667 - 16652 (-)
Gene ID: HRGMv2_4534_27_14
Type: CAZyme
Location: 16828 - 17844 (-)
Gene ID: HRGMv2_4534_27_15
Type: CAZyme
Location: 18320 - 19615 (-)
Gene ID: HRGMv2_4534_27_16
Type: TF
Location: 19810 - 20715 (+)
Gene ID: HRGMv2_4534_27_17
Type: CAZyme
Location: 20754 - 24203 (+)
Gene ID: HRGMv2_4534_27_18
Type: pfam
Location: 24378 - 25694 (+)
Gene ID: HRGMv2_4534_27_19
Type: TC
Location: 26004 - 27410 (-)
Gene ID: HRGMv2_4534_27_20
Type:
Location: 27601 - 27885 (-)
Gene ID: HRGMv2_4534_27_21
Type: TC
Location: 27918 - 29531 (-)
Gene ID: HRGMv2_4534_27_22
Type: TC
Location: 29521 - 30303 (-)
Gene ID: HRGMv2_4534_27_23
Type: STP
Location: 30291 - 31271 (-)
Gene ID: HRGMv2_4534_27_24
Type: pfam
Location: 32090 - 32701 (+)
Gene ID: HRGMv2_4534_27_25
Type: TC
Location: 34024 - 35340 (+)
Gene ID: HRGMv2_4534_27_26
Type: TC
Location: 35396 - 35977 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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