Cluster: HRGMv2_4534_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4534
- CGC Family ID: CGCFAM_00858
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4534_18 | HRGMv2_4534_18_1 | 357 | 2846 | - | GH38 |
| TF | HRGMv2_4534_18 | HRGMv2_4534_18_2 | 3254 | 4339 | + | 0037176 |
| TC | HRGMv2_4534_18 | HRGMv2_4534_18_3 | 4504 | 5190 | + | 3.A.1.140.1 |
| pfam | HRGMv2_4534_18 | HRGMv2_4534_18_4 | 5180 | 6091 | + | FtsX | FtsX_ECD |
| STP | HRGMv2_4534_18 | HRGMv2_4534_18_5 | 6081 | 7280 | + | Peptidase_M23 |
| TC | HRGMv2_4534_18 | HRGMv2_4534_18_6 | 7345 | 8724 | + | 9.B.174.1.1 |
Gene ID: HRGMv2_4534_18_1
Type: CAZyme
Location: 357 - 2846 (-)
Type: CAZyme
Location: 357 - 2846 (-)
Gene ID: HRGMv2_4534_18_2
Type: TF
Location: 3254 - 4339 (+)
Type: TF
Location: 3254 - 4339 (+)
Gene ID: HRGMv2_4534_18_3
Type: TC
Location: 4504 - 5190 (+)
Type: TC
Location: 4504 - 5190 (+)
Gene ID: HRGMv2_4534_18_4
Type: pfam
Location: 5180 - 6091 (+)
Type: pfam
Location: 5180 - 6091 (+)
Gene ID: HRGMv2_4534_18_5
Type: STP
Location: 6081 - 7280 (+)
Type: STP
Location: 6081 - 7280 (+)
Gene ID: HRGMv2_4534_18_6
Type: TC
Location: 7345 - 8724 (+)
Type: TC
Location: 7345 - 8724 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAHZIE01
Species
JAHZIE01 sp019419895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.