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Cluster: HRGMv2_4534_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4534_17 HRGMv2_4534_17_36 32797 33750 - 2.A.6.4.2
TC HRGMv2_4534_17 HRGMv2_4534_17_37 33747 35195 - 2.A.6.4.2
STP HRGMv2_4534_17 HRGMv2_4534_17_38 35576 36841 - Aminotran_1_2
CAZyme HRGMv2_4534_17 HRGMv2_4534_17_39 37240 38679 - GT5
pfam HRGMv2_4534_17 HRGMv2_4534_17_40 38715 39827 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4534_17 HRGMv2_4534_17_41 39830 41044 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4534_17 HRGMv2_4534_17_42 41091 41987 - GH13_9
CAZyme HRGMv2_4534_17 HRGMv2_4534_17_43 41954 42976 - CBM48 | GH13_9
Gene ID: HRGMv2_4534_17_36
Type: TC
Location: 32797 - 33750 (-)
Gene ID: HRGMv2_4534_17_37
Type: TC
Location: 33747 - 35195 (-)
Gene ID: HRGMv2_4534_17_38
Type: STP
Location: 35576 - 36841 (-)
Gene ID: HRGMv2_4534_17_39
Type: CAZyme
Location: 37240 - 38679 (-)
Gene ID: HRGMv2_4534_17_40
Type: pfam
Location: 38715 - 39827 (-)
Gene ID: HRGMv2_4534_17_41
Type: pfam
Location: 39830 - 41044 (-)
Gene ID: HRGMv2_4534_17_42
Type: CAZyme
Location: 41091 - 41987 (-)
Gene ID: HRGMv2_4534_17_43
Type: CAZyme
Location: 41954 - 42976 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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