Cluster: HRGMv2_4533_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4533
- CGC Family ID: CGCFAM_10632
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4533_2 | HRGMv2_4533_2_169 | 159578 | 160657 | - | GH179 |
| TF | HRGMv2_4533_2 | HRGMv2_4533_2_170 | 160731 | 161732 | - | LacI |
| pfam | HRGMv2_4533_2 | HRGMv2_4533_2_171 | 162070 | 163239 | + | LytR_cpsA_psr |
| TC | HRGMv2_4533_2 | HRGMv2_4533_2_172 | 163493 | 164995 | + | 2.A.40.7.2 |
| NULL(UNKNOWN) | HRGMv2_4533_2 | HRGMv2_4533_2_173 | 165089 | 165496 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4533_2 | HRGMv2_4533_2_174 | 165596 | 170689 | - | GH85 |
| CAZyme | HRGMv2_4533_2 | HRGMv2_4533_2_175 | 171002 | 176071 | - | GH85 |
Gene ID: HRGMv2_4533_2_169
Type: CAZyme
Location: 159578 - 160657 (-)
Type: CAZyme
Location: 159578 - 160657 (-)
Gene ID: HRGMv2_4533_2_170
Type: TF
Location: 160731 - 161732 (-)
Type: TF
Location: 160731 - 161732 (-)
Gene ID: HRGMv2_4533_2_171
Type: pfam
Location: 162070 - 163239 (+)
Type: pfam
Location: 162070 - 163239 (+)
Gene ID: HRGMv2_4533_2_172
Type: TC
Location: 163493 - 164995 (+)
Type: TC
Location: 163493 - 164995 (+)
Gene ID: HRGMv2_4533_2_173
Type:
Location: 165089 - 165496 (+)
Type:
Location: 165089 - 165496 (+)
Gene ID: HRGMv2_4533_2_174
Type: CAZyme
Location: 165596 - 170689 (-)
Type: CAZyme
Location: 165596 - 170689 (-)
Gene ID: HRGMv2_4533_2_175
Type: CAZyme
Location: 171002 - 176071 (-)
Type: CAZyme
Location: 171002 - 176071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp019418545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.