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Cluster: HRGMv2_4533_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4533_19 HRGMv2_4533_19_12 10085 11020 + 3.A.1.105.9
pfam HRGMv2_4533_19 HRGMv2_4533_19_13 11017 12279 + ABC2_membrane_3
CAZyme HRGMv2_4533_19 HRGMv2_4533_19_14 12606 14648 + GH13_9
pfam HRGMv2_4533_19 HRGMv2_4533_19_15 14669 15883 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
pfam HRGMv2_4533_19 HRGMv2_4533_19_16 15880 16998 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4533_19 HRGMv2_4533_19_17 17117 18565 + GT5
Gene ID: HRGMv2_4533_19_12
Type: TC
Location: 10085 - 11020 (+)
Gene ID: HRGMv2_4533_19_13
Type: pfam
Location: 11017 - 12279 (+)
Gene ID: HRGMv2_4533_19_14
Type: CAZyme
Location: 12606 - 14648 (+)
Gene ID: HRGMv2_4533_19_15
Type: pfam
Location: 14669 - 15883 (+)
Gene ID: HRGMv2_4533_19_16
Type: pfam
Location: 15880 - 16998 (+)
Gene ID: HRGMv2_4533_19_17
Type: CAZyme
Location: 17117 - 18565 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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