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Cluster: HRGMv2_4533_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4533_5 HRGMv2_4533_5_43 50318 51691 + 2.A.25.1.3
STP HRGMv2_4533_5 HRGMv2_4533_5_44 51759 52409 - Pribosyltran
TC HRGMv2_4533_5 HRGMv2_4533_5_45 52778 54160 + 4.A.1.2.9
TF HRGMv2_4533_5 HRGMv2_4533_5_46 54185 55210 + LacI
STP HRGMv2_4533_5 HRGMv2_4533_5_47 55173 56141 + PfkB
CAZyme HRGMv2_4533_5 HRGMv2_4533_5_48 56138 57481 + GH32
TF HRGMv2_4533_5 HRGMv2_4533_5_49 57544 58317 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4533_5 HRGMv2_4533_5_50 58538 59878 + GH4
sulfatase HRGMv2_4533_5 HRGMv2_4533_5_51 59945 61102 - S1_7
TC HRGMv2_4533_5 HRGMv2_4533_5_52 61248 63089 - 1.A.33.1.4
Gene ID: HRGMv2_4533_5_43
Type: TC
Location: 50318 - 51691 (+)
Gene ID: HRGMv2_4533_5_44
Type: STP
Location: 51759 - 52409 (-)
Gene ID: HRGMv2_4533_5_45
Type: TC
Location: 52778 - 54160 (+)
Gene ID: HRGMv2_4533_5_46
Type: TF
Location: 54185 - 55210 (+)
Gene ID: HRGMv2_4533_5_47
Type: STP
Location: 55173 - 56141 (+)
Gene ID: HRGMv2_4533_5_48
Type: CAZyme
Location: 56138 - 57481 (+)
Gene ID: HRGMv2_4533_5_49
Type: TF
Location: 57544 - 58317 (-)
Gene ID: HRGMv2_4533_5_50
Type: CAZyme
Location: 58538 - 59878 (+)
Gene ID: HRGMv2_4533_5_51
Type: sulfatase
Location: 59945 - 61102 (-)
Gene ID: HRGMv2_4533_5_52
Type: TC
Location: 61248 - 63089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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