Cluster: HRGMv2_4532_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4532
- CGC Family ID: CGCFAM_02255
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4532_23 | HRGMv2_4532_23_1 | 73 | 1041 | + | GT2 |
| TC | HRGMv2_4532_23 | HRGMv2_4532_23_2 | 1294 | 2133 | + | 8.A.5.1.4 |
| pfam | HRGMv2_4532_23 | HRGMv2_4532_23_3 | 2186 | 2803 | + | Flavodoxin_2 | FMN_red |
| TC | HRGMv2_4532_23 | HRGMv2_4532_23_4 | 2994 | 3440 | + | 9.A.11.1.1 |
| TC | HRGMv2_4532_23 | HRGMv2_4532_23_5 | 3453 | 4457 | + | 9.A.11.1.1 |
Gene ID: HRGMv2_4532_23_1
Type: CAZyme
Location: 73 - 1041 (+)
Type: CAZyme
Location: 73 - 1041 (+)
Gene ID: HRGMv2_4532_23_2
Type: TC
Location: 1294 - 2133 (+)
Type: TC
Location: 1294 - 2133 (+)
Gene ID: HRGMv2_4532_23_3
Type: pfam
Location: 2186 - 2803 (+)
Type: pfam
Location: 2186 - 2803 (+)
Gene ID: HRGMv2_4532_23_4
Type: TC
Location: 2994 - 3440 (+)
Type: TC
Location: 2994 - 3440 (+)
Gene ID: HRGMv2_4532_23_5
Type: TC
Location: 3453 - 4457 (+)
Type: TC
Location: 3453 - 4457 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4532_23_3 | omnivore > vegan | 2.36843 | 0.02711 |
| HRGMv2_4532_23_3 | vegetarian > vegan | 2.09188 | 0.00782 |