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Cluster: HRGMv2_4531_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4531_5 HRGMv2_4531_5_24 31272 33299 + CBM48 | GH13_9
pfam HRGMv2_4531_5 HRGMv2_4531_5_25 33435 34649 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
pfam HRGMv2_4531_5 HRGMv2_4531_5_26 34646 35767 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4531_5 HRGMv2_4531_5_27 35840 37258 + GT5
TC HRGMv2_4531_5 HRGMv2_4531_5_28 37478 37810 - 2.A.78.1.1
TC HRGMv2_4531_5 HRGMv2_4531_5_29 37807 38523 - 2.A.78.1.1
TF HRGMv2_4531_5 HRGMv2_4531_5_30 38752 39471 + HTH_3
TF HRGMv2_4531_5 HRGMv2_4531_5_31 39482 40375 - HTH_1
TC HRGMv2_4531_5 HRGMv2_4531_5_32 40643 41650 + 2.A.98.1.4
TC HRGMv2_4531_5 HRGMv2_4531_5_33 41740 43854 - 9.A.8.1.5
STP HRGMv2_4531_5 HRGMv2_4531_5_34 43869 44102 - FeoA
pfam HRGMv2_4531_5 HRGMv2_4531_5_35 44175 44513 - BofC_C
CAZyme HRGMv2_4531_5 HRGMv2_4531_5_36 44709 47066 + GT51
Gene ID: HRGMv2_4531_5_24
Type: CAZyme
Location: 31272 - 33299 (+)
Gene ID: HRGMv2_4531_5_25
Type: pfam
Location: 33435 - 34649 (+)
Gene ID: HRGMv2_4531_5_26
Type: pfam
Location: 34646 - 35767 (+)
Gene ID: HRGMv2_4531_5_27
Type: CAZyme
Location: 35840 - 37258 (+)
Gene ID: HRGMv2_4531_5_28
Type: TC
Location: 37478 - 37810 (-)
Gene ID: HRGMv2_4531_5_29
Type: TC
Location: 37807 - 38523 (-)
Gene ID: HRGMv2_4531_5_30
Type: TF
Location: 38752 - 39471 (+)
Gene ID: HRGMv2_4531_5_31
Type: TF
Location: 39482 - 40375 (-)
Gene ID: HRGMv2_4531_5_32
Type: TC
Location: 40643 - 41650 (+)
Gene ID: HRGMv2_4531_5_33
Type: TC
Location: 41740 - 43854 (-)
Gene ID: HRGMv2_4531_5_34
Type: STP
Location: 43869 - 44102 (-)
Gene ID: HRGMv2_4531_5_35
Type: pfam
Location: 44175 - 44513 (-)
Gene ID: HRGMv2_4531_5_36
Type: CAZyme
Location: 44709 - 47066 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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