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Cluster: HRGMv2_4531_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4531_3 HRGMv2_4531_3_31 33298 33561 + 8.A.8.1.4
pfam HRGMv2_4531_3 HRGMv2_4531_3_32 33800 34837 + DapB_N | DAP_DH_C
TF HRGMv2_4531_3 HRGMv2_4531_3_33 34953 35591 - HTH_3
CAZyme HRGMv2_4531_3 HRGMv2_4531_3_34 35733 40292 - CBM6 | GH3
TF HRGMv2_4531_3 HRGMv2_4531_3_35 40571 41440 + HTH_AraC
CAZyme HRGMv2_4531_3 HRGMv2_4531_3_36 41454 42551 - GT2
NULL(UNKNOWN) HRGMv2_4531_3 HRGMv2_4531_3_37 43424 43705 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4531_3 HRGMv2_4531_3_38 43842 44636 - 2.A.5.5.2
Gene ID: HRGMv2_4531_3_31
Type: TC
Location: 33298 - 33561 (+)
Gene ID: HRGMv2_4531_3_32
Type: pfam
Location: 33800 - 34837 (+)
Gene ID: HRGMv2_4531_3_33
Type: TF
Location: 34953 - 35591 (-)
Gene ID: HRGMv2_4531_3_34
Type: CAZyme
Location: 35733 - 40292 (-)
Gene ID: HRGMv2_4531_3_35
Type: TF
Location: 40571 - 41440 (+)
Gene ID: HRGMv2_4531_3_36
Type: CAZyme
Location: 41454 - 42551 (-)
Gene ID: HRGMv2_4531_3_37
Type:
Location: 43424 - 43705 (-)
Gene ID: HRGMv2_4531_3_38
Type: TC
Location: 43842 - 44636 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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