Cluster: HRGMv2_4531_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4531
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4531_2 | HRGMv2_4531_2_65 | 71091 | 71768 | - | 9.B.18.1.3 |
| STP | HRGMv2_4531_2 | HRGMv2_4531_2_66 | 71765 | 72970 | - | Aminotran_1_2 |
| pfam | HRGMv2_4531_2 | HRGMv2_4531_2_67 | 73368 | 74411 | - | Big_4 | Flg_new_2 |
| CAZyme | HRGMv2_4531_2 | HRGMv2_4531_2_68 | 74426 | 78508 | - | CBM35 | CBM35 | CBM35 | CBM35 |
| NULL(UNKNOWN) | HRGMv2_4531_2 | HRGMv2_4531_2_69 | 78763 | 79410 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4531_2 | HRGMv2_4531_2_70 | 79594 | 80475 | + | CbiQ |
| TC | HRGMv2_4531_2 | HRGMv2_4531_2_71 | 80448 | 81092 | + | 3.A.1.32.2 |
Gene ID: HRGMv2_4531_2_65
Type: TC
Location: 71091 - 71768 (-)
Type: TC
Location: 71091 - 71768 (-)
Gene ID: HRGMv2_4531_2_66
Type: STP
Location: 71765 - 72970 (-)
Type: STP
Location: 71765 - 72970 (-)
Gene ID: HRGMv2_4531_2_67
Type: pfam
Location: 73368 - 74411 (-)
Type: pfam
Location: 73368 - 74411 (-)
Gene ID: HRGMv2_4531_2_68
Type: CAZyme
Location: 74426 - 78508 (-)
Type: CAZyme
Location: 74426 - 78508 (-)
Gene ID: HRGMv2_4531_2_69
Type:
Location: 78763 - 79410 (-)
Type:
Location: 78763 - 79410 (-)
Gene ID: HRGMv2_4531_2_70
Type: pfam
Location: 79594 - 80475 (+)
Type: pfam
Location: 79594 - 80475 (+)
Gene ID: HRGMv2_4531_2_71
Type: TC
Location: 80448 - 81092 (+)
Type: TC
Location: 80448 - 81092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.